CDS

Accession Number TCMCG017C13997
gbkey CDS
Protein Id OMO95390.1
Location join(20547..20744,20998..21250,21431..22003,22394..22647,23076..23229,23772..24088)
GeneID InterPro:IPR011990
Organism Corchorus olitorius
locus_tag COLO4_15928

Protein

Length 582aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015842.1
Definition Tetratricopeptide-like helical [Corchorus olitorius]
Locus_tag COLO4_15928

EGGNOG-MAPPER Annotation

COG_category T
Description Tetratricopeptide repeat protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K21843        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006650        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0030258        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046486        [VIEW IN EMBL-EBI]
GO:0046488        [VIEW IN EMBL-EBI]
GO:0046834        [VIEW IN EMBL-EBI]
GO:0046854        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0072659        [VIEW IN EMBL-EBI]
GO:1990778        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGAAGTGCATCTGGTCAGGACAGCAGTTAAGAGTTGATGATACTGTTGCTTCTTCTGAGTCCTTAGCGACTCGGGACTATTCAGTTAGTGGTTACTCTTCTAGAGCTGGTGAAATGGTGGAAGCAAAAGGTGAAAATAGCAATATTGAAGAAGCCGAGTTGTCTCTTCGTGAGAGTGGTTATCTGAACTATGAGGAAGCCAGGGCATTGTTAGGAAGGCTTGAGTATCAAAAAGGAAATATAGAAGCTGCACTTCATGTATTTGAAGGAATCGATGTTGCTGCTGTGACTTCCAAGATGAAAGTATCCCTTGGTAGAAGATGTGAACAAAATCGACGCCGCTCACAAAGTGATGCTGTGCCAGCCATGTCCTTGCATGCTGTTAGCTTACTTCTTGAAGCTATTTTCATGAAAGCAAAATCATTACAGCATCTTGGAAGGTTTGGAGAGGCTGCTAAATCATGCAAAGTCATTTTGGACACTGTTGAATCTGCATTGCCCGATGGCCTGCCCGACAACTTCTCTACTGATTGTAAATTACAGGAAGTTTTGGGCAAAGCTGTGGAGTTGCTTCCAGAGCTGTGGAAACTTGCAGGGGATCCCCAAGAAGCCATCTTGTCATACAGGCGGGCTCTACTCTACTACTGGAATCTTGATACAGCAACCAAAGCAAAGCTAGAAAAGGAATTTGCAGTATTGCTTTTATATAGTGGTGCTGAAGCAAGCCCTCCAAACCTCCGTTCGCAGATGGAAGGTTCCTTTGCGCCACGAAACAACATAGAAGAGGCTATTCTCTTATTACTTATTCTACTGAGAAAATTCGTTCTCAAGAGGATTGGATGGGATCCGTCAATCTTGGATCATCTTACTTTTGCTCTATCCATTTCAGGGGAACTAAGAGCCATAGCTCATCAGGTTGAAGAATTGCATCCAGAGATCATGAAAAGAAAAGAAAAATATTGTACTTTGGCTCTCTGCTACTATGGGGAAGGTGAAGACATAGTTGCTTTGAATCTGTTGCGTTCTAATGTGAAAGGATATGTCCTATTGGCTCGGATATTGTCTGCTCAAAAACTGTTCGTTGATGCTGAAACAGTAATTAATGCTGCTCTTGAGCAAACTGGAAAGTGGGACCAAGGAGAACTGTTGAGAACCAAAGCCAAACTTCAGATTGCGCAGGGCCAATTAAAAAGTGCAGTAGAGACGTATACTCACCTTCTTGCTGTTCTCCAAGTTCAATATAAAAGCTCAAGTGCTGGGAAGAAACTTCTGAAGACAAATGGAAAGTGGGATCGGAGCTTGGAAATGGAAACATGGCATGATCTAGCAAATGTGTACACAAGCTTATCACAGTGGCGGGATGCTGAAATCTGTCTGTCAAAATCTAAGGCGATCAGTCCTTTTTCTGCTTCTAGATGGTACTCTACAGGTTTACTTAACGAAGCTAAGGGGTTCCACCAAGAAGCTCTGAGATCATACAGGAAAGCATTAGATGTTGAACCCACACATGTTCCAAGCTTGATATCTACCGCTTGCATCCTCAAACAGCTTGGTGGCCAATCAATGCCCATAGTGAGAGGTTTTTTGACCGATGCACTTCGACTCGACAGAACAAATCCCGCTGCCTGGTACAATCTGGGGTTGCTCTACAAATCTGATATCAGTGCAACAGCCCTAGAGGCTGCCGAATGCTTCGAGGCTGCTGCTCTTCTTGAAGAATCTGCACCAGTTGAACCCTTTAGATAA
Protein:  
MMKCIWSGQQLRVDDTVASSESLATRDYSVSGYSSRAGEMVEAKGENSNIEEAELSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDVAAVTSKMKVSLGRRCEQNRRRSQSDAVPAMSLHAVSLLLEAIFMKAKSLQHLGRFGEAAKSCKVILDTVESALPDGLPDNFSTDCKLQEVLGKAVELLPELWKLAGDPQEAILSYRRALLYYWNLDTATKAKLEKEFAVLLLYSGAEASPPNLRSQMEGSFAPRNNIEEAILLLLILLRKFVLKRIGWDPSILDHLTFALSISGELRAIAHQVEELHPEIMKRKEKYCTLALCYYGEGEDIVALNLLRSNVKGYVLLARILSAQKLFVDAETVINAALEQTGKWDQGELLRTKAKLQIAQGQLKSAVETYTHLLAVLQVQYKSSSAGKKLLKTNGKWDRSLEMETWHDLANVYTSLSQWRDAEICLSKSKAISPFSASRWYSTGLLNEAKGFHQEALRSYRKALDVEPTHVPSLISTACILKQLGGQSMPIVRGFLTDALRLDRTNPAAWYNLGLLYKSDISATALEAAECFEAAALLEESAPVEPFR